BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024F10SP1|AL428256
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1373 1602 0.0
3x_Contig2 735 0.0
>3x_Contig1373
Length = 6197
Score = 1602 bits (807), Expect = 0.0
Identities = 809/811 (99%)
Strand = Plus / Plus
Query: 1 tttatccgttattgttgagggctatccctctttctcagaaagttccaggacttcaggaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 tttatccgttattgttgagggctatccctctttctcagaaagttccaggacttcaggaca 1406
Query: 61 cgctattgcaaatagccctattatatgcaaaactaaataaatgaggttgttttgtaaacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1407 cgctattgcaaatagccctattatatgcaaaactaaataaatgaggttgttttgtaaacg 1466
Query: 121 tttgattatataactatagaataattcattaagaggttattagttcttccactctagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1467 tttgattatataactatagaataattcattaagaggttattagttcttccactctagaag 1526
Query: 181 agatattaggtcttgtgattcacagctcatgttaaagaaggaatgatgcaagagttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 agatattaggtcttgtgattcacagctcatgttaaagaaggaatgatgcaagagttcttc 1586
Query: 241 ggtagatgctctgtattttacatcaacgcataagcaaacgcttaagaaacgctttatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1587 ggtagatgctctgtattttacatcaacgcataagcaaacgcttaagaaacgctttatttc 1646
Query: 301 aagagatagatattctggatgttttagcttaggtgtaccatttgttgcaatcaaatataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1647 aagagatagatattctggatgttttagcttaggtgtaccatttgttgcaatcaaatataa 1706
Query: 361 ggctttcaatggttcctcattcaaatatggtggttcactttcaagcatttcaattgtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1707 ggctttcaatggttcctcattcaaatatggtggttcactttcaagcatttcaattgtcat 1766
Query: 421 aatacctaaggaccaaacgtcaaccttttcatcatactctctttgcttgacaacttcagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 aatacctaaggaccaaacgtcaaccttttcatcatactctctttgcttgacaacttcagg 1826
Query: 481 ggccatccagtaaggagttcctaccatagtagctcttttacttctcttatcggtcaactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 ggccatccagtaaggagttcctaccatagtagctcttttacttctcttatcggtcaactt 1886
Query: 541 agcacagaacccaaagtcagtgatcttaacccgtcctctggtatcaagtaaaacgttatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 agcacagaacccaaagtcagtgatcttaacccgtcctctggtatcaagtaaaacgttatc 1946
Query: 601 ggatttgatatctctgtgaatgatgtgcttgtcatgcaaaaatttcaacccttggcaagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1947 ggatttgatatctctgtgaatgatgtgcttgtcatgcaaaaatttcaacccttggcaagt 2006
Query: 661 ttcgcggacaatatatgcratttgtggctcggtcaaaggtgattgaccactgctgccagt 720
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2007 ttcgcggacaatatatgcaatttgtggctcggtcaaaggtgattgaccactgctgccagt 2066
Query: 721 tgggctgttttctattatgtctgtcagggaacctccttccatgtattccataaccaccca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2067 tgggctgttttctattatgtctgtcagggaacctccttccatgtattccataaccaccca 2126
Query: 781 caaatcatcttcagtytttagatatgcctct 811
||||||||||||||| |||||||||||||||
Sbjct: 2127 caaatcatcttcagtctttagatatgcctct 2157
>3x_Contig2
Length = 877
Score = 735 bits (370), Expect = 0.0
Identities = 427/446 (95%)
Strand = Plus / Plus
Query: 33 tctcagaaagttccaggacttcaggacacgctattgcaaatagccctattatatgcaaaa 92
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctcagtaagttccaggacttcaggacacgctattgcaaatagccctattatatgcaaaa 60
Query: 93 ctaaataaatgaggttgttttgtaaacgtttgattatataactatagaataattcattaa 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaaataaatgaggttgttttgtaaacgtttgattatataactatagaataattcattaa 120
Query: 153 gaggttattagttcttccactctagaagagatattaggtcttgtgattcacagctcatgt 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggttattagttcttccactctagaagagatattaggtcttgtgattcacagctcatgt 180
Query: 213 taaagaaggaatgatgcaagagttcttcggtagatgctctgtattttacatcaacgcata 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaagaaggaatgatgcaagagttcttcggtagatgctctgtattttacatcaacgcata 240
Query: 273 agcaaacgcttaagaaacgctttatttcaagagatagatattctggatgttttagcttag 332
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 241 agcaaacgcttaagaaacgctttatttcaagagatagatattctggattttttatcttat 300
Query: 333 gtgtaccatttgttgcaatcaaatataaggctttcaatggttcctcattcaaatatggtg 392
| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 301 ttttaccattttttgcaatcaaatataaccctttcaatccttcctcattcaaatatggtg 360
Query: 393 gttcactttcaagcatttcaattgtcataatacctaaggaccaaacgtcaaccttttcat 452
||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||
Sbjct: 361 gttcactttcaagcatttcaattttcataatacctaatttccaaacttcaaccttttcat 420
Query: 453 catactctctttgcttgacaacttca 478
|||||||||||| || |||||||||
Sbjct: 421 catactctcttttctatacaacttca 446
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5759
Number of Sequences: 1807
Number of extensions: 5759
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 2
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)